ENSDARG00000016527


Danio rerio

Features
Gene ID: ENSDARG00000016527
  
Biological name :helz2
  
Synonyms : helicase with zinc finger 2, transcriptional coactivator / helz2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 58569808
Gene end: 58615281
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128833
Ensembl peptide - ENSDARP00000146134
NCBI entrez gene - 562461     See in Manteia.
RefSeq - XM_003198847
swissprot - X1WF29
ZFIN ID - ZDB-GENE-120920-1
Ensembl - ENSDARG00000016527
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-97a13.6ENSDARG0000001260034
AL935128.1 / HELZ2* / E9QAM5* / Q9BYK8* / helicase with zinc finger 2* / Helicase with zinc finger domain 2 *ENSDARG0000001244624
helz / helicase with zinc finger / P42694*ENSDARG0000003056014
upf1 / upf1 regulator of nonsense transcripts homolog (yeast) / Q92900* / Q9EPU0* / UPF1, RNA helicase and ATPase*ENSDARG000000163027
Q1LXK5 / mov10b.2 / Moloney leukemia virus 10b, tandem duplicate 2 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*ENSDARG000000560657
mov10a / Mov10 RISC complex RNA helicase a / MOV10* / Q9HCE1* / Mov10 RISC complex RNA helicase*ENSDARG000000158297
Q1LXK4 / mov10b.1 / Moloney leukemia virus 10b, tandem duplicate 1 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*ENSDARG000000611777


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR003593  AAA+ ATPase domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031191  Helicase with zinc finger domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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