ENSDARG00000017119


Danio rerio

Features
Gene ID: ENSDARG00000017119
  
Biological name :vps37a
  
Synonyms : vacuolar protein sorting 37A / vps37a
  
Possible biological names infered from orthology : Q8CHS8 / Q8NEZ2 / VPS37A, ESCRT-I subunit
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 16463079
Gene end: 16480213
  
Corresponding Affymetrix probe sets: Dr.1493.1.A1_at (Zebrafish Array)   NM_199990_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135747
Ensembl peptide - ENSDARP00000073136
NCBI entrez gene - 336368     See in Manteia.
RefSeq - NM_199990
RefSeq Peptide - NP_956284
swissprot - A0A0R4IKB7
swissprot - Q6PBU2
ZFIN ID - ZDB-GENE-030131-8312
Ensembl - ENSDARG00000017119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS37AENSGALG00000013646Gallus gallus
 Q8NEZ2ENSG00000155975Homo sapiens
 Q8CHS8ENSMUSG00000031600Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vps37b / vacuolar protein sorting 37 homolog B (S. cerevisiae) / Q8R0J7* / Q9H9H4* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*ENSDARG0000003931912
si:ch211-284f22.3 / Q86XT2* / Q810I0* / VPS37D* / VPS37D, ESCRT-I subunit* / vacuolar protein sorting 37D*ENSDARG0000009705511
vps37c / vacuolar protein sorting 37 homolog C (S. cerevisiae) / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*ENSDARG0000003183611
zgc:114173 / Q8R0J7* / Q9H9H4* / VPS37B* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*ENSDARG0000010114311


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007626 locomotory behavior IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 cellular_componentGO:0000813 ESCRT I complex IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased mobility , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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