ENSG00000155975


Homo sapiens

Features
Gene ID: ENSG00000155975
  
Biological name :VPS37A
  
Synonyms : Q8NEZ2 / VPS37A / VPS37A, ESCRT-I subunit
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p22
Gene start: 17246571
Gene end: 17302427
  
Corresponding Affymetrix probe sets: 225378_at (Human Genome U133 Plus 2.0 Array)   228024_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429227
Ensembl peptide - ENSP00000428823
Ensembl peptide - ENSP00000429680
Ensembl peptide - ENSP00000430933
Ensembl peptide - ENSP00000430456
Ensembl peptide - ENSP00000429858
Ensembl peptide - ENSP00000318629
Ensembl peptide - ENSP00000412824
NCBI entrez gene - 137492     See in Manteia.
OMIM - 609927
RefSeq - XM_017013026
RefSeq - XM_005273400
RefSeq - XM_005273401
RefSeq - XM_006716286
RefSeq - XM_017013021
RefSeq - XM_017013022
RefSeq - XM_017013023
RefSeq - XM_017013024
RefSeq - XM_017013025
RefSeq - NM_001145152
RefSeq - NM_152415
RefSeq Peptide - NP_001138624
RefSeq Peptide - NP_689628
swissprot - E5RHB8
swissprot - H0YBN0
swissprot - E5RJX6
swissprot - E5RG91
swissprot - Q8NEZ2
swissprot - E5RJ10
Ensembl - ENSG00000155975
  
Related genetic diseases (OMIM): 614898 - Spastic paraplegia 53, autosomal recessive, 614898
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps37aENSDARG00000017119Danio rerio
 VPS37AENSGALG00000013646Gallus gallus
 Q8CHS8ENSMUSG00000031600Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86XT2 / VPS37D / VPS37D, ESCRT-I subunitENSG0000017642812
Q9H9H4 / VPS37B / VPS37B, ESCRT-I subunitENSG0000013972212
A5D8V6 / VPS37C / VPS37C, ESCRT-I subunitENSG0000016798710


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR037202  ESCRT assembly domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport TAS
 biological_processGO:0016236 macroautophagy TAS
 biological_processGO:0019058 viral life cycle TAS
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 biological_processGO:0036258 multivesicular body assembly TAS
 biological_processGO:0039702 viral budding via host ESCRT complex TAS
 biological_processGO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IMP
 biological_processGO:0075733 intracellular transport of virus TAS
 cellular_componentGO:0000813 ESCRT I complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010008 endosome membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0043657 host cell IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Budding and maturation of HIV virion
Membrane binding and targetting of GAG proteins
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000372 Auditory canal abnormality 
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 HP:0000750 Impaired language development 
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000998 Hypertrichosis "Hypertrichosis is increased hair growth that is abnormal in quantity or location." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002119 Ventriculomegaly 
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 HP:0002169 Clonus 
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 HP:0002451 Limb dystonia 
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 HP:0002495 Impaired vibratory sense "A decrease in the ability to perceive vibration. Clinically, this is usually tested with a tuning fork which vibrates at 128 Hz and is applied to bony prominences such as the malleoli at the ankles or the metacarpal-phalangeal joints. There is a slow decay of vibration from the tuning fork. The degree of vibratory sense loss can be crudely estimated by counting the number of seconds that the examiner can perceive the vibration longer than the patient." [HPO:curators]
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 HP:0002539 Cortical dysplasia 
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 HP:0002808 Kyphosis 
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 HP:0005692 Joint hyperflexibility 
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 HP:0007350 Hyperreflexia in upper limbs 
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 HP:0010831 Impaired proprioception "A loss or impairment of the sensation of the relative position of parts of the body and joint position." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0200049 Upper limb hypertonia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000131475 VPS25 / Q9BRG1 / vacuolar protein sorting 25 homolog  / reaction
 ENSG00000074319 Q99816 / TSG101 / tumor susceptibility 101  / complex
 ENSG00000115145 STAM2 / O75886 / signal transducing adaptor molecule 2  / reaction
 ENSG00000159210 SNF8 / Q96H20 / SNF8, ESCRT-II complex subunit  / reaction
 ENSG00000160948 VPS28 / Q9UK41 / VPS28, ESCRT-I subunit  / complex
 ENSG00000141971 MVB12A / Q96EY5 / multivesicular body subunit 12A  / complex
 ENSG00000196814 MVB12B / Q9H7P6 / multivesicular body subunit 12B  / complex
 ENSG00000165006 UBAP1 / Q9NZ09 / ubiquitin associated protein 1  / complex
 ENSG00000185359 HGS / O14964 / hepatocyte growth factor-regulated tyrosine kinase substrate  / reaction
 ENSG00000136100 VPS36 / Q86VN1 / vacuolar protein sorting 36 homolog  / reaction
 ENSG00000136738 STAM / Q92783 / signal transducing adaptor molecule  / reaction






 

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