ENSG00000165006


Homo sapiens

Features
Gene ID: ENSG00000165006
  
Biological name :UBAP1
  
Synonyms : Q9NZ09 / UBAP1 / ubiquitin associated protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: p13.3
Gene start: 34179005
Gene end: 34252523
  
Corresponding Affymetrix probe sets: 221490_at (Human Genome U133 Plus 2.0 Array)   46270_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000297661
Ensembl peptide - ENSP00000368484
Ensembl peptide - ENSP00000486574
Ensembl peptide - ENSP00000487222
Ensembl peptide - ENSP00000352541
NCBI entrez gene - 51271     See in Manteia.
OMIM - 609787
RefSeq - XM_017014802
RefSeq - NM_001171201
RefSeq - NM_001171202
RefSeq - NM_001171203
RefSeq - NM_001171204
RefSeq - NM_016525
RefSeq - XM_006716779
RefSeq - XM_011517898
RefSeq - XM_011517899
RefSeq - XM_011517900
RefSeq - XM_017014801
RefSeq Peptide - NP_001164673
RefSeq Peptide - NP_001164675
RefSeq Peptide - NP_057609
RefSeq Peptide - NP_001164672
RefSeq Peptide - NP_001164674
swissprot - A0A0D9SG79
swissprot - Q9NZ09
Ensembl - ENSG00000165006
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubap1ENSDARG00000058746Danio rerio
 UBAP1ENSGALG00000021378Gallus gallus
 Ubap1ENSMUSG00000028437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F5GYI3 / UBAP1L / ubiquitin associated protein 1 likeENSG0000024692218


Protein motifs (from Interpro)
Interpro ID Name
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR023340  UMA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport TAS
 biological_processGO:0019058 viral life cycle TAS
 biological_processGO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IMP
 biological_processGO:0075733 intracellular transport of virus TAS
 cellular_componentGO:0000813 ESCRT I complex IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0010008 endosome membrane TAS
 cellular_componentGO:0043657 host cell IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043130 ubiquitin binding IDA


Pathways (from Reactome)
Pathway description
Budding and maturation of HIV virion
Membrane binding and targetting of GAG proteins
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000131475 VPS25 / Q9BRG1 / vacuolar protein sorting 25 homolog  / reaction
 ENSG00000074319 Q99816 / TSG101 / tumor susceptibility 101  / complex
 ENSG00000115145 STAM2 / O75886 / signal transducing adaptor molecule 2  / reaction
 ENSG00000159210 SNF8 / Q96H20 / SNF8, ESCRT-II complex subunit  / reaction
 ENSG00000167987 A5D8V6 / VPS37C / VPS37C, ESCRT-I subunit  / complex
 ENSG00000139722 Q9H9H4 / VPS37B / VPS37B, ESCRT-I subunit  / complex
 ENSG00000160948 VPS28 / Q9UK41 / VPS28, ESCRT-I subunit  / complex
 ENSG00000155975 Q8NEZ2 / VPS37A / VPS37A, ESCRT-I subunit  / complex
 ENSG00000176428 Q86XT2 / VPS37D / VPS37D, ESCRT-I subunit  / complex
 ENSG00000185359 HGS / O14964 / hepatocyte growth factor-regulated tyrosine kinase substrate  / reaction
 ENSG00000136100 VPS36 / Q86VN1 / vacuolar protein sorting 36 homolog  / reaction
 ENSG00000136738 STAM / Q92783 / signal transducing adaptor molecule  / reaction






 

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