ENSDARG00000058746


Danio rerio

Features
Gene ID: ENSDARG00000058746
  
Biological name :ubap1
  
Synonyms : ubap1 / ubiquitin associated protein 1
  
Possible biological names infered from orthology : Q8BH48 / Q9NZ09
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 11865972
Gene end: 11884517
  
Corresponding Affymetrix probe sets: Dr.3196.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000076116
NCBI entrez gene - 393183     See in Manteia.
swissprot - F6P6X0
ZFIN ID - ZDB-GENE-040426-950
Ensembl - ENSDARG00000058746
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBAP1ENSGALG00000021378Gallus gallus
 UBAP1ENSG00000165006Homo sapiens
 Ubap1ENSMUSG00000028437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ubap1la / ubiquitin associated protein 1-like a / F5GYI3* / UBAP1L* / ubiquitin associated protein 1 like*ENSDARG0000008921721


Protein motifs (from Interpro)
Interpro ID Name
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR023340  UMA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001078 thymus thymus decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000005318 stam2 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 / O75886* / O88811* / signal transducing adaptor molecule 2*  / reaction
 ENSDARG00000058076 snf8 / Q5U3V9 / SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) / Q9CZ28* / Q96H20* / SNF8, ESCRT-II complex subunit* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cere...  / reaction
 ENSDARG00000031836 vps37c / vacuolar protein sorting 37 homolog C (S. cerevisiae) / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*  / complex
 ENSDARG00000097055 si:ch211-284f22.3 / Q86XT2* / Q810I0* / VPS37D* / VPS37D, ESCRT-I subunit* / vacuolar protein sorting 37D*  / complex
 ENSDARG00000103203 vps28 / vacuolar protein sorting 28 (yeast) / Q9D1C8* / Q9UK41* / VPS28, ESCRT-I subunit* / vacuolar protein sorting 28*  / complex
 ENSDARG00000039319 vps37b / vacuolar protein sorting 37 homolog B (S. cerevisiae) / Q8R0J7* / Q9H9H4* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*  / complex
 ENSDARG00000011897 tsg101b / tumor susceptibility 101b / Q99816* / TSG101* / Q61187* / tumor susceptibility 101* / tumor susceptibility gene 101*  / complex
 ENSDARG00000020960 hgs / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSDARG00000002127 stam / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 / P70297* / Q92783* / signal transducing adaptor molecule*  / reaction
 ENSDARG00000059079 vps25 / vacuolar protein sorting 25 homolog (S. cerevisiae) / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25* / vacuolar protein sorting 25 homolog*  / reaction






 

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