ENSMUSG00000028437


Mus musculus

Features
Gene ID: ENSMUSG00000028437
  
Biological name :Ubap1
  
Synonyms : Q8BH48 / Ubap1 / ubiquitin-associated protein 1
  
Possible biological names infered from orthology : Q9NZ09
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: A5
Gene start: 41348996
Gene end: 41390525
  
Corresponding Affymetrix probe sets: 10504056 (MoGene1.0st)   1423185_a_at (Mouse Genome 430 2.0 Array)   1444624_at (Mouse Genome 430 2.0 Array)   1450893_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000072643
Ensembl peptide - ENSMUSP00000103695
Ensembl peptide - ENSMUSP00000123491
NCBI entrez gene - 67123     See in Manteia.
MGI - MGI:2149543
RefSeq - XM_006538198
RefSeq - NM_001290454
RefSeq - NM_023305
RefSeq - XM_006538196
RefSeq - XM_006538197
RefSeq Peptide - NP_075794
RefSeq Peptide - NP_001277383
RefSeq Peptide - NP_001342437
swissprot - Q8BH48
swissprot - F6WHE1
Ensembl - ENSMUSG00000028437
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubap1ENSDARG00000058746Danio rerio
 UBAP1ENSGALG00000021378Gallus gallus
 UBAP1ENSG00000165006Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ubap1l / ubiquitin-associated protein 1-like / F5GYI3*ENSMUSG0000008622820


Protein motifs (from Interpro)
Interpro ID Name
 IPR009060  UBA-like superfamily
 IPR015940  Ubiquitin-associated domain
 IPR023340  UMA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway ISO
 cellular_componentGO:0000813 ESCRT I complex ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005886 plasma membrane ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0043130 ubiquitin binding ISS


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000014402 Q61187 / Tsg101 / tumor susceptibility gene 101 / Q99816* / tumor susceptibility 101*  / complex
 ENSMUSG00000043614 Q810I0 / Vps37d / vacuolar protein sorting 37D / Q86XT2* / VPS37D, ESCRT-I subunit*  / complex
 ENSMUSG00000055371 Stam2 / O88811 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 / O75886* / signal transducing adaptor molecule 2*  / reaction
 ENSMUSG00000078656 Vps25 / Q9CQ80 / vacuolar protein sorting 25 / Q9BRG1* / vacuolar protein sorting 25 homolog*  / reaction
 ENSMUSG00000048832 Q8R105 / Vps37c / vacuolar protein sorting 37C / A5D8V6* / VPS37C, ESCRT-I subunit*  / complex
 ENSMUSG00000066278 Q8R0J7 / Vps37b / vacuolar protein sorting 37B / Q9H9H4* / VPS37B, ESCRT-I subunit*  / complex
 ENSMUSG00000031479 Vps36 / Q91XD6 / vacuolar protein sorting 36 / Q86VN1* / vacuolar protein sorting 36 homolog*  / reaction
 ENSMUSG00000031600 Q8CHS8 / Vps37a / vacuolar protein sorting 37A / Q8NEZ2* / VPS37A, ESCRT-I subunit*  / complex
 ENSMUSG00000026718 Stam / P70297 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 / Q92783* / signal transducing adaptor molecule*  / reaction
 ENSMUSG00000115987 Vps28 / Q9D1C8 / vacuolar protein sorting 28 / Q9UK41* / VPS28, ESCRT-I subunit*  / complex
 ENSMUSG00000006058 Snf8 / Q9CZ28 / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) (Snf8), transcript variant 2, mRNA. / Q96H20* / SNF8, ESCRT-II complex subunit*  / reaction






 

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