ENSDARG00000011897


Danio rerio

Features
Gene ID: ENSDARG00000011897
  
Biological name :tsg101b
  
Synonyms : tsg101b / tumor susceptibility 101b
  
Possible biological names infered from orthology : Q61187 / Q99816 / TSG101 / tumor susceptibility 101 / tumor susceptibility gene 101
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 49619375
Gene end: 49637278
  
Corresponding Affymetrix probe sets: Dr.14926.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000013839
NCBI entrez gene - 100333057     See in Manteia.
swissprot - E7F4Y8
ZFIN ID - ZDB-GENE-130530-542
Ensembl - ENSDARG00000011897
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSG101ENSGALG00000006312Gallus gallus
 Q99816ENSG00000074319Homo sapiens
 Q61187ENSMUSG00000014402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tsg101a / tumor susceptibility 101a / Q99816* / TSG101* / Q61187* / tumor susceptibility 101* / tumor susceptibility gene 101*ENSDARG0000004085477
zgc:123278ENSDARG0000009611016


Protein motifs (from Interpro)
Interpro ID Name
 IPR008883  Ubiquitin E2 variant, N-terminal
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR017916  Steadiness box (SB) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process IEA
 biological_processGO:0015031 protein transport IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000031836 vps37c / vacuolar protein sorting 37 homolog C (S. cerevisiae) / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*  / complex
 ENSDARG00000103203 vps28 / vacuolar protein sorting 28 (yeast) / Q9D1C8* / Q9UK41* / VPS28, ESCRT-I subunit* / vacuolar protein sorting 28*  / complex
 ENSDARG00000039319 vps37b / vacuolar protein sorting 37 homolog B (S. cerevisiae) / Q8R0J7* / Q9H9H4* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*  / complex
 ENSDARG00000097055 si:ch211-284f22.3 / Q86XT2* / Q810I0* / VPS37D* / VPS37D, ESCRT-I subunit* / vacuolar protein sorting 37D*  / complex
 ENSDARG00000005318 stam2 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 / O75886* / O88811* / signal transducing adaptor molecule 2*  / reaction
 ENSDARG00000058076 snf8 / Q5U3V9 / SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) / Q9CZ28* / Q96H20* / SNF8, ESCRT-II complex subunit* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cere...  / reaction
 ENSDARG00000058746 ubap1 / ubiquitin associated protein 1 / Q8BH48* / Q9NZ09*  / complex
 ENSDARG00000020960 hgs / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSDARG00000002127 stam / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 / P70297* / Q92783* / signal transducing adaptor molecule*  / reaction
 ENSDARG00000059079 vps25 / vacuolar protein sorting 25 homolog (S. cerevisiae) / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25* / vacuolar protein sorting 25 homolog*  / reaction






 

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