ENSDARG00000039319


Danio rerio

Features
Gene ID: ENSDARG00000039319
  
Biological name :vps37b
  
Synonyms : vacuolar protein sorting 37 homolog B (S. cerevisiae) / vps37b
  
Possible biological names infered from orthology : Q8R0J7 / Q9H9H4 / vacuolar protein sorting 37B / VPS37B, ESCRT-I subunit
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 27999886
Gene end: 28016805
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073103
NCBI entrez gene - 559483     See in Manteia.
RefSeq - NM_001099996
RefSeq Peptide - NP_001093466
swissprot - A3KGZ5
ZFIN ID - ZDB-GENE-060526-254
Ensembl - ENSDARG00000039319
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VPS37BENSGALG00000003743Gallus gallus
 Q9H9H4ENSG00000139722Homo sapiens
 Q8R0J7ENSMUSG00000066278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:114173 / Q8R0J7* / Q9H9H4* / VPS37B* / VPS37B, ESCRT-I subunit* / vacuolar protein sorting 37B*ENSDARG0000010114341
vps37c / vacuolar protein sorting 37 homolog C (S. cerevisiae) / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*ENSDARG0000003183628
si:ch211-284f22.3 / Q86XT2* / Q810I0* / VPS37D* / VPS37D, ESCRT-I subunit* / vacuolar protein sorting 37D*ENSDARG0000009705524
vps37a / vacuolar protein sorting 37A / Q8CHS8* / Q8NEZ2* / VPS37A, ESCRT-I subunit*ENSDARG0000001711916


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 cellular_componentGO:0000813 ESCRT I complex IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000011897 tsg101b / tumor susceptibility 101b / Q99816* / TSG101* / Q61187* / tumor susceptibility 101* / tumor susceptibility gene 101*  / complex
 ENSDARG00000005318 stam2 / signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 / O75886* / O88811* / signal transducing adaptor molecule 2*  / reaction
 ENSDARG00000058076 snf8 / Q5U3V9 / SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) / Q9CZ28* / Q96H20* / SNF8, ESCRT-II complex subunit* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cere...  / reaction
 ENSDARG00000103203 vps28 / vacuolar protein sorting 28 (yeast) / Q9D1C8* / Q9UK41* / VPS28, ESCRT-I subunit* / vacuolar protein sorting 28*  / complex
 ENSDARG00000058746 ubap1 / ubiquitin associated protein 1 / Q8BH48* / Q9NZ09*  / complex
 ENSDARG00000020960 hgs / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSDARG00000002127 stam / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 / P70297* / Q92783* / signal transducing adaptor molecule*  / reaction
 ENSDARG00000059079 vps25 / vacuolar protein sorting 25 homolog (S. cerevisiae) / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25* / vacuolar protein sorting 25 homolog*  / reaction






 

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