ENSGALG00000003743


Gallus gallus

Features
Gene ID: ENSGALG00000003743
  
Biological name :VPS37B
  
Synonyms : VPS37B / VPS37B, ESCRT-I subunit
  
Possible biological names infered from orthology : Q8R0J7 / Q9H9H4 / vacuolar protein sorting 37B
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 5272665
Gene end: 5282778
  
Corresponding Affymetrix probe sets: Gga.10026.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005929
NCBI entrez gene - 416835     See in Manteia.
RefSeq - XM_415126
swissprot - F1NN84
Ensembl - ENSGALG00000003743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps37bENSDARG00000039319Danio rerio
 zgc:114173ENSDARG00000101143Danio rerio
 Q9H9H4ENSG00000139722Homo sapiens
 Q8R0J7ENSMUSG00000066278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS37C / vacuolar protein sorting-associated protein 37C / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*ENSGALG0000003854135
VPS37A / VPS37A, ESCRT-I subunit / Q8CHS8* / Q8NEZ2* / vacuolar protein sorting 37A*ENSGALG0000001364618


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 biological_processGO:1902188 positive regulation of viral release from host cell IEA
 biological_processGO:1903774 positive regulation of viral budding via host ESCRT complex IEA
 cellular_componentGO:0000813 ESCRT I complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0030496 midbody IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001309 SNF8 / SNF8, ESCRT-II complex subunit / Q96H20* / Q9CZ28* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) (Snf8), transcript variant 2, mRNA.*  / reaction
 ENSGALG00000006312 TSG101 / tumor susceptibility 101 / Q61187* / Q99816* / tumor susceptibility gene 101*  / complex
 ENSGALG00000000950 MVB12B / multivesicular body subunit 12B / Q6KAU4* / Q9H7P6*  / complex
 ENSGALG00000007224 HGS / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / complex / reaction
 ENSGALG00000035287 STAM / signal transducing adaptor molecule / P70297* / Q92783* / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1*  / reaction
 ENSGALG00000034262 VPS25 / vacuolar protein sorting 25 homolog / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25*  / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr