ENSGALG00000038541


Gallus gallus

Features
Gene ID: ENSGALG00000038541
  
Biological name :VPS37C
  
Synonyms : vacuolar protein sorting-associated protein 37C / VPS37C
  
Possible biological names infered from orthology : A5D8V6 / Q8R105 / vacuolar protein sorting 37C / VPS37C, ESCRT-I subunit
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 29471
Gene end: 33286
  
Corresponding Affymetrix probe sets: Gga.7007.1.S1_s_at (Chicken Array)   GgaAffx.26444.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051299
Ensembl peptide - ENSGALP00000057724
NCBI entrez gene - 423023     See in Manteia.
RefSeq - NM_001199569
RefSeq - XM_015286079
RefSeq - XM_015286080
RefSeq Peptide - NP_001186498
swissprot - A0A1D5PXM8
swissprot - A0A1D5PEU0
Ensembl - ENSGALG00000038541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps37cENSDARG00000031836Danio rerio
 A5D8V6ENSG00000167987Homo sapiens
 Q8R105ENSMUSG00000048832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS37B / VPS37B, ESCRT-I subunit / Q8R0J7* / Q9H9H4* / vacuolar protein sorting 37B*ENSGALG0000000374328
VPS37A / VPS37A, ESCRT-I subunit / Q8CHS8* / Q8NEZ2* / vacuolar protein sorting 37A*ENSGALG0000001364612


Protein motifs (from Interpro)
Interpro ID Name
 IPR009851  Modifier of rudimentary, Modr


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032509 endosome transport via multivesicular body sorting pathway IEA
 cellular_componentGO:0000813 ESCRT I complex IEA
 molecular_functionGO:0048306 calcium-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001309 SNF8 / SNF8, ESCRT-II complex subunit / Q96H20* / Q9CZ28* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) (Snf8), transcript variant 2, mRNA.*  / reaction
 ENSGALG00000007224 HGS / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction / complex
 ENSGALG00000035287 STAM / signal transducing adaptor molecule / P70297* / Q92783* / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1*  / reaction
 ENSGALG00000000950 MVB12B / multivesicular body subunit 12B / Q6KAU4* / Q9H7P6*  / complex
 ENSGALG00000006312 TSG101 / tumor susceptibility 101 / Q61187* / Q99816* / tumor susceptibility gene 101*  / complex
 ENSGALG00000034262 VPS25 / vacuolar protein sorting 25 homolog / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25*  / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction / complex






 

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