ENSGALG00000000950


Gallus gallus

Features
Gene ID: ENSGALG00000000950
  
Biological name :MVB12B
  
Synonyms : multivesicular body subunit 12B / MVB12B
  
Possible biological names infered from orthology : Q6KAU4 / Q9H7P6
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 10448297
Gene end: 10497105
  
Corresponding Affymetrix probe sets: Gga.5899.1.S1_at (Chicken Array)   Gga.5899.1.S1_s_at (Chicken Array)   GgaAffx.22614.1.A1_at (Chicken Array)   GgaAffx.22643.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050805
Ensembl peptide - ENSGALP00000001400
Ensembl peptide - ENSGALP00000047982
NCBI entrez gene - 417092     See in Manteia.
RefSeq - XM_015279394
RefSeq - XM_015279391
RefSeq - XM_015279392
RefSeq - XM_015279393
RefSeq - NM_001030677
RefSeq - XM_015279389
RefSeq - XM_015279390
RefSeq Peptide - NP_001025848
swissprot - F1P3Y0
swissprot - A0A1D5P5L1
Ensembl - ENSGALG00000000950
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mvb12baENSDARG00000091619Danio rerio
 MVB12BENSG00000196814Homo sapiens
 Mvb12bENSMUSG00000038740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018798  Multivesicular body subunit 12
 IPR023340  UMA domain
 IPR023341  MABP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019075 virus maturation IEA
 biological_processGO:0042058 regulation of epidermal growth factor receptor signaling pathway IEA
 biological_processGO:0048524 positive regulation of viral process IEA
 cellular_componentGO:0000813 ESCRT I complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0031982 vesicle IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001309 SNF8 / SNF8, ESCRT-II complex subunit / Q96H20* / Q9CZ28* / Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) (Snf8), transcript variant 2, mRNA.*  / reaction
 ENSGALG00000003743 VPS37B / VPS37B, ESCRT-I subunit / Q8R0J7* / Q9H9H4* / vacuolar protein sorting 37B*  / complex
 ENSGALG00000006312 TSG101 / tumor susceptibility 101 / Q61187* / Q99816* / tumor susceptibility gene 101*  / complex
 ENSGALG00000007224 HGS / hepatocyte growth factor-regulated tyrosine kinase substrate / O14964* / hepatocyte growth factor-regulated tyrosine kinase substrate isoform 2 *  / reaction
 ENSGALG00000013646 VPS37A / VPS37A, ESCRT-I subunit / Q8CHS8* / Q8NEZ2* / vacuolar protein sorting 37A*  / complex
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction / complex
 ENSGALG00000035287 STAM / signal transducing adaptor molecule / P70297* / Q92783* / signal transducing adaptor molecule (SH3 domain and ITAM motif) 1*  / reaction
 ENSGALG00000038541 VPS37C / vacuolar protein sorting-associated protein 37C / Q8R105* / A5D8V6* / VPS37C, ESCRT-I subunit* / vacuolar protein sorting 37C*  / complex
 ENSGALG00000034262 VPS25 / vacuolar protein sorting 25 homolog / Q9BRG1* / Q9CQ80* / vacuolar protein sorting 25*  / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / complex / reaction






 

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