ENSDARG00000017444


Danio rerio

Features
Gene ID: ENSDARG00000017444
  
Biological name :hal
  
Synonyms : hal / histidine ammonia-lyase
  
Possible biological names infered from orthology : P35492 / P42357
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 7954140
Gene end: 7974494
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141662
NCBI entrez gene - 100004331     See in Manteia.
RefSeq - NM_001089457
RefSeq Peptide - NP_001082926
swissprot - A4FUP1
ZFIN ID - ZDB-GENE-070410-5
Ensembl - ENSDARG00000017444
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HALENSGALG00000011421Gallus gallus
 HALENSG00000084110Homo sapiens
 HalENSMUSG00000020017Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001106  Aromatic amino acid lyase
 IPR005921  Histidine ammonia-lyase
 IPR008948  L-Aspartase-like
 IPR021922  Par3/HAL, N-terminal
 IPR022313  Phenylalanine/histidine ammonia-lyases, active site
 IPR024083  Fumarase/histidase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006547 histidine metabolic process IEA
 biological_processGO:0006548 histidine catabolic process IEA
 biological_processGO:0019556 histidine catabolic process to glutamate and formamide IEA
 biological_processGO:0019557 histidine catabolic process to glutamate and formate IEA
 biological_processGO:0060218 hematopoietic stem cell differentiation IMP
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004397 histidine ammonia-lyase activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016841 ammonia-lyase activity IEA


Pathways (from Reactome)
Pathway description
Histidine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005028 ventral wall of dorsal aorta ventral wall of dorsal aorta hematopoietic stem cell decreased amount , abnormal
ventral wall of dorsal aorta decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr