ENSDARG00000017665


Danio rerio

Features
Gene ID: ENSDARG00000017665
  
Biological name :snrkb
  
Synonyms : SNF related kinase b / snrkb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 13498188
Gene end: 13526319
  
Corresponding Affymetrix probe sets: Dr.15263.1.A1_at (Zebrafish Array)   Dr.25951.1.A1_at (Zebrafish Array)   NM_200833_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000025934
NCBI entrez gene - 393806     See in Manteia.
RefSeq - NM_200833
RefSeq Peptide - NP_957127
swissprot - F1QEF3
ZFIN ID - ZDB-GENE-040426-1724
Ensembl - ENSDARG00000017665
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026043Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snrka / SNF related kinase a / SNRK* / Q9NRH2* / SNF related kinase*ENSDARG0000007083246
sik1 / salt-inducible kinase 1 / SIK1B* / Q60670* / P57059* / salt inducible kinase 1B (putative)* / Serine/threonine-protein kinase SIK1 *ENSDARG0000005860622
mark3b / MAP/microtubule affinity-regulating kinase 3b / MARK1* / MARK3* / P27448* / Q9P0L2* / Q8VHJ5* / Q03141* / Serine/threonine-protein kinase MARK1 * / microtubule affinity regulating ...ENSDARG0000002663022
mark2a / MAP/microtubule affinity-regulating kinase 2a / MARK2* / Q7KZI7* / microtubule affinity regulating kinase 2*ENSDARG0000007990522
mark2b / MAP/microtubule affinity-regulating kinase 2b / MARK2* / Q7KZI7* / microtubule affinity regulating kinase 2*ENSDARG0000003245822
MARK4 / si:dkey-31m14.7 / Q96L34* / Q8CIP4* / microtubule affinity regulating kinase 4* / MAP/microtubule affinity-regulating kinase 4 *ENSDARG0000002496621
sik2b / salt-inducible kinase 2b / SIK2* / Q9H0K1* / salt inducible kinase 2*ENSDARG0000006231521
mark4a / MAP/microtubule affinity-regulating kinase 4a / MARK4* / Q8CIP4* / Q96L34* / microtubule affinity regulating kinase 4* / MAP/microtubule affinity-regulating kinase 4 *ENSDARG0000002391421
sik2a / salt-inducible kinase 2a / SIK2* / Q9H0K1* / salt inducible kinase 2*ENSDARG0000007961821
mark3a / MAP/microtubule affinity-regulating kinase 3aENSDARG0000001934521
mark1 / MAP/microtubule affinity-regulating kinase 1ENSDARG0000010401418
sik3 / SIK family kinase 3ENSDARG0000008808318
nim1k / NIM1 serine/threonine protein kinase / Q8BHI9* / Q8IY84* / Serine/threonine-protein kinase NIM1 *ENSDARG0000007408717
si:ch211-22d5.2ENSDARG0000007903115


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR011009  Protein kinase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0035556 intracellular signal transduction IBA
 biological_processGO:0060217 hemangioblast cell differentiation IMP
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IDA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta blood vessel endothelial cell decreased amount , abnormal
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 ZFA:0000477 posterior cardinal vein posterior cardinal vein blood vessel endothelial cell decreased amount , abnormal
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 ZFA:0001114 head head blood vasculature decreased amount , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel aplastic , abnormal
intersegmental vessel blood vessel endothelial cell decreased amount , abnormal
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 ZFA:0009036 blood vessel endothelial cell blood vessel endothelial cell decreased amount , abnormal
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 ZFA:0009258 angioblastic mesenchymal cell angioblastic mesenchymal cell apoptotic , abnormal
angioblastic mesenchymal cell decreased amount , abnormal
angioblastic mesenchymal cell mislocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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