ENSDARG00000017809


Danio rerio

Features
Gene ID: ENSDARG00000017809
  
Biological name :stard3
  
Synonyms : Q9DFS4 / stard3 / StAR-related lipid transfer (START) domain containing 3
  
Possible biological names infered from orthology : Q14849 / Q61542 / StAR related lipid transfer domain containing 3 / START domain containing 3
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 4968947
Gene end: 4985996
  
Corresponding Affymetrix probe sets: Dr.2274.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007948
Ensembl peptide - ENSDARP00000113891
NCBI entrez gene - 63998     See in Manteia.
RefSeq - XM_005159353
RefSeq Peptide - NP_571737
swissprot - Q1LYP7
swissprot - Q9DFS4
ZFIN ID - ZDB-GENE-001120-2
Ensembl - ENSDARG00000017809
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STARD3ENSGALG00000014607Gallus gallus
 Q14849ENSG00000131748Homo sapiens
 Q61542ENSMUSG00000018167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stard3nl / STARD3 N-terminal like / O95772* / Q9DCI3* / Mus musculus STARD3 N-terminal like (Stard3nl), transcript variant 2, mRNA.*ENSDARG0000004542127
star / Q9DG10 / steroidogenic acute regulatory protein / P51557* / P49675* / Steroidogenic acute regulatory protein, mitochondrial *ENSDARG0000000613720
CABZ01074994.1ENSDARG0000003822617


Protein motifs (from Interpro)
Interpro ID Name
 IPR000799  Steroidogenic acute regulatory protein-like
 IPR002913  START domain
 IPR019498  MENTAL domain
 IPR023393  START-like domain superfamily
 IPR029867  StAR-related lipid transfer protein 3, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0030301 cholesterol transport ISS
 biological_processGO:0099044 vesicle tethering to endoplasmic reticulum ISS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031902 late endosome membrane ISS
 cellular_componentGO:0044232 organelle membrane contact site ISS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0015485 cholesterol binding ISS
 molecular_functionGO:0017127 cholesterol transporter activity IEA
 molecular_functionGO:0042803 protein homodimerization activity ISS


Pathways (from Reactome)
Pathway description
Pregnenolone biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000006137 star / Q9DG10 / steroidogenic acute regulatory protein / P51557* / P49675* / Steroidogenic acute regulatory protein, mitochondrial *  / reaction






 

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