ENSDARG00000017910


Danio rerio

Features
Gene ID: ENSDARG00000017910
  
Biological name :pdss1
  
Synonyms : pdss1 / prenyl (decaprenyl) diphosphate synthase, subunit 1
  
Possible biological names infered from orthology : decaprenyl diphosphate synthase subunit 1 / prenyl (solanesyl) diphosphate synthase, subunit 1 / Q33DR2 / Q5T2R2
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 6015299
Gene end: 6024466
  
Corresponding Affymetrix probe sets: Dr.25336.1.S1_at (Zebrafish Array)   Dr.3760.1.A1_at (Zebrafish Array)   NM_001017656_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000040864
NCBI entrez gene - 550349     See in Manteia.
RefSeq - XM_005162505
RefSeq - NM_001017656
RefSeq Peptide - NP_001017656
swissprot - Q567H1
ZFIN ID - ZDB-GENE-030131-4430
Ensembl - ENSDARG00000017910
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDSS1ENSGALG00000007559Gallus gallus
 PDSS1ENSG00000148459Homo sapiens
 Pdss1ENSMUSG00000026784Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdss2 / prenyl (decaprenyl) diphosphate synthase, subunit 2 / Q33DR3* / Q86YH6* / decaprenyl diphosphate synthase subunit 2* / prenyl (solanesyl) diphosphate synthase, subunit 2*ENSDARG0000001256318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000092  Polyprenyl synthetase
 IPR008949  Isoprenoid synthase domain superfamily
 IPR033749  Polyprenyl synthetase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008299 isoprenoid biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Ubiquinol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000017910 pdss1 / prenyl (decaprenyl) diphosphate synthase, subunit 1 / Q33DR2* / Q5T2R2* / decaprenyl diphosphate synthase subunit 1* / prenyl (solanesyl) diphosphate synthase, subunit 1*  / complex






 

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