ENSDARG00000018006


Danio rerio

Features
Gene ID: ENSDARG00000018006
  
Biological name :vrk1
  
Synonyms : vaccinia related kinase 1 / vrk1
  
Possible biological names infered from orthology : Q80X41 / Q99986
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 18773961
Gene end: 18797245
  
Corresponding Affymetrix probe sets: Dr.2062.1.S1_at (Zebrafish Array)   NM_213385_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000045990
NCBI entrez gene - 406694     See in Manteia.
RefSeq - NM_213385
RefSeq Peptide - NP_998550
swissprot - F1QA55
ZFIN ID - ZDB-GENE-040426-2709
Ensembl - ENSDARG00000018006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VRK1ENSGALG00000011116Gallus gallus
 VRK1ENSG00000100749Homo sapiens
 Vrk1ENSMUSG00000021115Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vrk2 / vaccinia related kinase 2 / Q86Y07* / Q8BN21*ENSDARG0000002154744
vrk3 / vaccinia related kinase 3 / Q8IV63* / Q8K3G5*ENSDARG0000003605628
csnk1g2b / casein kinase 1, gamma 2b / Q8BVP5* / P78368* / CSNK1G2* / casein kinase 1 gamma 2* / Casein kinase I isoform gamma-2 *ENSDARG0000003405622
csnk1g2a / casein kinase 1, gamma 2a / Q8BVP5* / P78368* / CSNK1G2* / casein kinase 1 gamma 2* / Casein kinase I isoform gamma-2 *ENSDARG0000000545822
Q5PRD4 / csnk1g1 / casein kinase 1, gamma 1 / Q8BTH8* / Q9HCP0* / Casein kinase I isoform gamma-1 *ENSDARG0000010434221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Initiation of Nuclear Envelope Reformation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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