ENSDARG00000018010


Danio rerio

Features
Gene ID: ENSDARG00000018010
  
Biological name :crtap
  
Synonyms : cartilage associated protein / crtap
  
Possible biological names infered from orthology : O75718 / Q9CYD3
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 42609132
Gene end: 42617723
  
Corresponding Affymetrix probe sets: Dr.21803.1.A1_at (Zebrafish Array)   NM_001001406_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000021474
NCBI entrez gene - 406626     See in Manteia.
RefSeq - NM_001001406
RefSeq Peptide - NP_001001406
swissprot - Q1L8P0
ZFIN ID - ZDB-GENE-040426-2619
Ensembl - ENSDARG00000018010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRTAPENSGALG00000034163Gallus gallus
 CRTAPENSG00000170275Homo sapiens
 CrtapENSMUSG00000032431Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
p3h4 / prolyl 3-hydroxylase family member 4 (non-enzymatic) / Q8K2B0* / Q92791* / Endoplasmic reticulum protein SC65 *ENSDARG0000010408948
p3h1 / prolyl 3-hydroxylase 1 / Q32P28* / Q3V1T4*ENSDARG0000007121228
p3h2 / prolyl 3-hydroxylase 2 / Q8CG71* / Q8IVL5*ENSDARG0000010302625
p3h3 / prolyl 3-hydroxylase 3 / Q8CG70* / Q8IVL6*ENSDARG0000005787924


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018400 peptidyl-proline hydroxylation to 3-hydroxy-L-proline IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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