ENSG00000170275


Homo sapiens

Features
Gene ID: ENSG00000170275
  
Biological name :CRTAP
  
Synonyms : cartilage associated protein / CRTAP / O75718
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p22.3
Gene start: 33113979
Gene end: 33147773
  
Corresponding Affymetrix probe sets: 1554464_a_at (Human Genome U133 Plus 2.0 Array)   1555889_a_at (Human Genome U133 Plus 2.0 Array)   201380_at (Human Genome U133 Plus 2.0 Array)   226656_at (Human Genome U133 Plus 2.0 Array)   227138_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000323696
Ensembl peptide - ENSP00000409997
NCBI entrez gene - 10491     See in Manteia.
OMIM - 605497
RefSeq - NM_006371
RefSeq Peptide - NP_006362
swissprot - C9JP16
swissprot - O75718
Ensembl - ENSG00000170275
  
Related genetic diseases (OMIM): 610682 - Osteogenesis imperfecta, type VII, 610682
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 crtapENSDARG00000018010Danio rerio
 CRTAPENSGALG00000034163Gallus gallus
 CrtapENSMUSG00000032431Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P3H4 / Q92791 / prolyl 3-hydroxylase family member 4 (non-enzymatic)ENSG0000014169653
P3H1 / Q32P28 / prolyl 3-hydroxylase 1ENSG0000011738534
P3H2 / Q8IVL5 / prolyl 3-hydroxylase 2ENSG0000009053031
P3H3 / Q8IVL6 / prolyl 3-hydroxylase 3ENSG0000011081126


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR033212  Cartilage-associated protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0018400 peptidyl-proline hydroxylation to 3-hydroxy-L-proline IEA
 biological_processGO:0050821 protein stabilization IMP
 biological_processGO:0061077 chaperone-mediated protein folding ISS
 biological_processGO:1901874 negative regulation of post-translational protein modification IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0032991 protein-containing complex ISS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0044877 protein-containing complex binding ISS


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000260 Wide anterior fontanel "Enlargement of the anterior fontanelle with respect to age-dependent norms." [HPO:curators]
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 HP:0000270 Delayed closure of fontanelles "Infants normally have two fontanels at birth, the diamond-shaped anterior fontanelle at the junction of the coronal and sagittal sutures, and the posterior fontanelle at the intersection of the occipital and parietal bones. The posterior fontanelle usually closes by the 8th week of life, and the anterior fontanel closes by the 18th month of life on average. This term applies if there is delay of closure of the fontanelles beyond the normal age." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000520 Proptosis 
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 HP:0000592 Blue sclerae 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000774 Narrow chest 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001522 Death in infancy 
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 HP:0001623 breech presentation 
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 HP:0002645 Wormian bones 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002812 Coxa vara 
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 HP:0002953 Vertebral compression fractures 
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 HP:0002979 Bowing of the legs 
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 HP:0002983 Micromelia 
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 HP:0003179 Protrusio acetabuli "Protrusion of the acetabulum, which is the socket that together with the head of the femur forms the heep joint. The protrusion is the result of increased depth of the socket and results in medial displacement of the femoral head." [HPO:curators]
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 HP:0003783 Externally rotated/abducted legs 
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 HP:0004960 absent pulmonary artery 
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 HP:0005304 Hypoplastic pulmonary veins 
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 HP:0005474 Poorly ossified calvaria "Abnormal reduction in ossification of the calvaria (roof of the skull consisting of the frontal bone, parietal bones, temporal bones, and occipital bone)." [HPO:curators]
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 HP:0005855 Multiple prenatal fractures "The presence of bone fractures in the prenatal period that are diagnosed at birth or before." [HPO:curators]
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 HP:0006367 Broad crumpled long bones 
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 HP:0006640 Multiple rib fractures 
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 HP:0008905 Rhizomelic short stature 
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 HP:0010537 Wide cranial sutures "An abnormally increased width of the cranial sutures." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166794 PPIB / P23284 / peptidylprolyl isomerase B  / complex
 ENSG00000117385 P3H1 / Q32P28 / prolyl 3-hydroxylase 1  / complex






 

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