ENSDARG00000018162


Danio rerio

Features
Gene ID: ENSDARG00000018162
  
Biological name :ctnnal1
  
Synonyms : catenin (cadherin-associated protein), alpha-like 1 / ctnnal1
  
Possible biological names infered from orthology : Alpha-catulin / catenin alpha like 1 / O88327 / Q9UBT7
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 34751687
Gene end: 34873566
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013157
NCBI entrez gene - 100034581     See in Manteia.
RefSeq - NM_001144054
RefSeq Peptide - NP_001137526
swissprot - Q1LU92
ZFIN ID - ZDB-GENE-060503-507
Ensembl - ENSDARG00000018162
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTNNAL1ENSGALG00000013207Gallus gallus
 Q9UBT7ENSG00000119326Homo sapiens
 O88327ENSMUSG00000038816Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ctnna1 / catenin (cadherin-associated protein), alpha 1 / P26231* / P35221* / catenin alpha 1*ENSDARG0000010244127
B7ZC77 / ctnna2 / catenin (cadherin-associated protein), alpha 2 / Q61301* / P26232* / catenin alpha 2* / Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript va...ENSDARG0000002478526
vcla / vinculin a / VCL* / Q64727* / P18206* / vinculin*ENSDARG0000004496814
vcla / vinculin a / VCL* / P18206* / vinculin*ENSDARG0000009869511


Protein motifs (from Interpro)
Interpro ID Name
 IPR001033  Alpha-catenin
 IPR006077  Vinculin/alpha-catenin
 IPR030045  Alpha-catulin 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007266 Rho protein signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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