ENSDARG00000018743


Danio rerio

Features
Gene ID: ENSDARG00000018743
  
Biological name :scamp5a
  
Synonyms : Q6P0C7 / scamp5a / secretory carrier membrane protein 5a
  
Possible biological names infered from orthology : Q8TAC9 / Q9JKD3 / SCAMP5 / Secretory carrier-associated membrane protein 5 / secretory carrier membrane protein 5
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 31837228
Gene end: 31863374
  
Corresponding Affymetrix probe sets: Dr.19471.1.A1_at (Zebrafish Array)   NM_205547_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000031172
NCBI entrez gene - 324467     See in Manteia.
RefSeq - NM_205547
RefSeq Peptide - NP_991110
swissprot - Q6P0C7
ZFIN ID - ZDB-GENE-030131-3188
Ensembl - ENSDARG00000018743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAMP5ENSGALG00000014116Gallus gallus
 Q8TAC9ENSG00000198794Homo sapiens
 Q9JKD3ENSMUSG00000040722Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scamp5b / secretory carrier membrane protein 5b / Q9JKD3* / SCAMP5* / Q8TAC9* / secretory carrier membrane protein 5* / Secretory carrier-associated membrane protein 5 *ENSDARG0000004027477
scamp4 / secretory carrier membrane protein 4 / Q969E2* / Q9JKV5*ENSDARG0000001053157
scamp2l / secretory carrier membrane protein 2, like / SCAMP2* / O15127* / Q9ERN0* / secretory carrier membrane protein 2*ENSDARG0000001701049
scamp2 / secretory carrier membrane protein 2 / O15127* / Q9ERN0*ENSDARG0000001027947
scamp3 / secretory carrier membrane protein 3 / O14828* / O35609* / Secretory carrier-associated membrane protein 3 *ENSDARG0000001676545
scamp1 / secretory carrier membrane protein 1 / O15126* / Q8K021*ENSDARG0000003691143


Protein motifs (from Interpro)
Interpro ID Name
 IPR007273  SCAMP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0045956 positive regulation of calcium ion-dependent exocytosis ISS
 biological_processGO:0050715 positive regulation of cytokine secretion ISS
 cellular_componentGO:0000139 Golgi membrane ISS
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0055038 recycling endosome membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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