ENSDARG00000010279


Danio rerio

Features
Gene ID: ENSDARG00000010279
  
Biological name :scamp2
  
Synonyms : scamp2 / secretory carrier membrane protein 2
  
Possible biological names infered from orthology : O15127 / Q9ERN0
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 3015676
Gene end: 3034668
  
Corresponding Affymetrix probe sets: Dr.7564.1.S1_at (Zebrafish Array)   NM_213378_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000053404
Ensembl peptide - ENSDARP00000124098
NCBI entrez gene - 406687     See in Manteia.
RefSeq - NM_213378
RefSeq Peptide - NP_998543
swissprot - F8W3F9
swissprot - Q7ZV08
ZFIN ID - ZDB-GENE-040426-2702
Ensembl - ENSDARG00000010279
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAMP2ENSGALG00000001689Gallus gallus
 O15127ENSG00000140497Homo sapiens
 Q9ERN0ENSMUSG00000040188Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scamp2l / secretory carrier membrane protein 2, like / SCAMP2* / O15127* / Q9ERN0* / secretory carrier membrane protein 2*ENSDARG0000001701068
scamp1 / secretory carrier membrane protein 1 / O15126* / Q8K021*ENSDARG0000003691154
scamp3 / secretory carrier membrane protein 3 / O14828* / O35609* / Secretory carrier-associated membrane protein 3 *ENSDARG0000001676552
Q6P0C7 / scamp5a / secretory carrier membrane protein 5a / SCAMP5* / Q9JKD3* / Q8TAC9* / secretory carrier membrane protein 5* / Secretory carrier-associated membrane protein 5 *ENSDARG0000001874333
scamp5b / secretory carrier membrane protein 5b / Q9JKD3* / SCAMP5* / Q8TAC9* / secretory carrier membrane protein 5* / Secretory carrier-associated membrane protein 5 *ENSDARG0000004027431
scamp4 / secretory carrier membrane protein 4 / Q969E2* / Q9JKV5*ENSDARG0000001053129


Protein motifs (from Interpro)
Interpro ID Name
 IPR007273  SCAMP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr