ENSMUSG00000040188


Mus musculus

Features
Gene ID: ENSMUSG00000040188
  
Biological name :Scamp2
  
Synonyms : Q9ERN0 / Scamp2 / secretory carrier membrane protein 2
  
Possible biological names infered from orthology : O15127
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: B
Gene start: 57560943
Gene end: 57588795
  
Corresponding Affymetrix probe sets: 10585721 (MoGene1.0st)   1416611_at (Mouse Genome 430 2.0 Array)   1448404_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148996
Ensembl peptide - ENSMUSP00000150920
Ensembl peptide - ENSMUSP00000038350
NCBI entrez gene - 24044     See in Manteia.
MGI - MGI:1346518
RefSeq - NM_022813
RefSeq - XM_006511152
RefSeq Peptide - NP_073724
swissprot - A0A1L1SUU4
swissprot - Q3TAL2
swissprot - Q9ERN0
swissprot - A0A1L1SQD1
Ensembl - ENSMUSG00000040188
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scamp2ENSDARG00000010279Danio rerio
 scamp2lENSDARG00000017010Danio rerio
 SCAMP2ENSGALG00000001689Gallus gallus
 O15127ENSG00000140497Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8K021 / Scamp1 / secretory carrier membrane protein 1 / O15126*ENSMUSG0000002168753
O35609 / Scamp3 / Secretory carrier-associated membrane protein 3 / O14828* / secretory carrier membrane protein 3*ENSMUSG0000002804950
Q9JKD3 / Scamp5 / Secretory carrier-associated membrane protein 5 / Q8TAC9* / secretory carrier membrane protein 5*ENSMUSG0000004072230
Q9JKV5 / Scamp4 / secretory carrier membrane protein 4 / Q969E2*ENSMUSG0000011394929


Protein motifs (from Interpro)
Interpro ID Name
 IPR007273  SCAMP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030133 transport vesicle IEA
 cellular_componentGO:0032588 trans-Golgi network membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0055038 recycling endosome membrane ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr