ENSDARG00000036911


Danio rerio

Features
Gene ID: ENSDARG00000036911
  
Biological name :scamp1
  
Synonyms : scamp1 / secretory carrier membrane protein 1
  
Possible biological names infered from orthology : O15126 / Q8K021
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 3715820
Gene end: 3770636
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000053595
NCBI entrez gene - 402992     See in Manteia.
RefSeq - NM_205692
RefSeq Peptide - NP_991255
swissprot - Q6P0B3
ZFIN ID - ZDB-GENE-040426-1803
Ensembl - ENSDARG00000036911
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAMP1ENSGALG00000004425Gallus gallus
 O15126ENSG00000085365Homo sapiens
 Q8K021ENSMUSG00000021687Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scamp2l / secretory carrier membrane protein 2, like / SCAMP2* / O15127* / Q9ERN0* / secretory carrier membrane protein 2*ENSDARG0000001701052
scamp3 / secretory carrier membrane protein 3 / O14828* / O35609* / Secretory carrier-associated membrane protein 3 *ENSDARG0000001676552
scamp2 / secretory carrier membrane protein 2 / O15127* / Q9ERN0*ENSDARG0000001027952
Q6P0C7 / scamp5a / secretory carrier membrane protein 5a / SCAMP5* / Q9JKD3* / Q8TAC9* / secretory carrier membrane protein 5* / Secretory carrier-associated membrane protein 5 *ENSDARG0000001874329
scamp5b / secretory carrier membrane protein 5b / Q9JKD3* / SCAMP5* / Q8TAC9* / secretory carrier membrane protein 5* / Secretory carrier-associated membrane protein 5 *ENSDARG0000004027429
scamp4 / secretory carrier membrane protein 4 / Q969E2* / Q9JKV5*ENSDARG0000001053126


Protein motifs (from Interpro)
Interpro ID Name
 IPR007273  SCAMP


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr