ENSDARG00000020395


Danio rerio

Features
Gene ID: ENSDARG00000020395
  
Biological name :mical2b
  
Synonyms : F1RA39 / mical2b / microtubule associated monooxygenase, calponin and LIM domain containing 2b
  
Possible biological names infered from orthology : [F-actin]-monooxygenase MICAL2 / MICAL2 / microtubule associated monooxygenase, calponin and LIM domain containing 2 / O94851 / Q6ZW33 / Q8BML1
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 16194450
Gene end: 16309747
  
Corresponding Affymetrix probe sets: Dr.24280.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134150
Ensembl peptide - ENSDARP00000153343
Ensembl peptide - ENSDARP00000148540
Ensembl peptide - ENSDARP00000099449
Ensembl peptide - ENSDARP00000116980
Ensembl peptide - ENSDARP00000119970
Ensembl peptide - ENSDARP00000132594
NCBI entrez gene - 569564     See in Manteia.
RefSeq - XM_005174339
RefSeq - XM_021470514
swissprot - A0A0R4IK88
swissprot - A0A0A0MPT7
swissprot - F1RA39
ZFIN ID - ZDB-GENE-061207-15
Ensembl - ENSDARG00000020395
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MICAL2ENSGALG00000005540Gallus gallus
 MICAL2ENSG00000133816Homo sapiens
 Mical2ENSMUSG00000038244Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F1QH17 / mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009701741
F1QWK4 / mical3b / microtubule associated monooxygenase, calponin and LIM domain containing 3b / MICAL3* / Q7RTP6* / Q8CJ19* / [F-actin]-monooxygenase MICAL3 * / microtubule associated mono...ENSDARG0000009473238
mical2a / microtubule associated monooxygenase, calponin and LIM domain containing 2a / Q6ZW33* / MICAL2* / O94851* / microtubule associated monooxygenase, calponin and LIM domain containing 2*ENSDARG0000007560833
E7F9T0 / mical1 / microtubule associated monooxygenase, calponin and LIM domain containing 1 / Q8TDZ2* / Q8VDP3* / Mus musculus microtubule associated monooxygenase, calponin and LIM domain...ENSDARG0000001180929
mical3a / microtubule associated monooxygenase, calponin and LIM domain containing 3a / Q9D5U9* / Micalcl* / AC132392.1* / MICAL C-terminal-like protein *ENSDARG000000219799
ehbp1l1a / EH domain binding protein 1-like 1a / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG000000573538
ehbp1 / EH domain binding protein 1 / Q69ZW3* / Q8NDI1*ENSDARG000000436438
micall1a / MICAL-like 1aENSDARG000000798118
micall2a / mical-like 2a / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG000001023668
ehbp1l1b / EH domain binding protein 1-like 1b / Q8N3D4* / EHBP1L1* / EH domain binding protein 1 like 1* / EH domain-binding protein 1-like protein 1 isoform C *ENSDARG000000798958
micall2b / mical-like 2b / Q3TN34* / Q8IY33* / MICALL2* / MICAL like 2* / MICAL-like protein 2 *ENSDARG000000178348
micall1b.2 / MICAL like 1b, duplicate 2ENSDARG000000870167
specc1 / sperm antigen with calponin homology and coiled-coil domains 1 / Q5M775* / Q5SXY1*ENSDARG000000294806
specc1lb / sperm antigen with calponin homology and coiled-coil domains 1-like b / Q69YQ0* / Q2KN98* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / sperm ant...ENSDARG000000422326
Q2KN93 / specc1la / sperm antigen with calponin homology and coiled-coil domains 1-like a / Q2KN98* / Q69YQ0* / SPECC1L* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)* / ...ENSDARG000000067196
smtnl1 / smoothelin-like 1ENSDARG000000412574
smtnl / smoothelin, like / SMTNL2* / Q2TAL5* / Q8CI12* / smoothelin like 2* / Smoothelin-like protein 2 *ENSDARG000000556324
smtnb / smoothelin bENSDARG000000594423
si:ch211-195o20.7ENSDARG000000892212
smtna / smoothelin a / A8MU46* / Q99LM3* / SMTNL1* / smoothelin like 1* / Smoothelin-like protein 1 *ENSDARG000000746522


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR001781  Zinc finger, LIM-type
 IPR002938  FAD-binding domain
 IPR022735  bMERB domain
 IPR023753  FAD/NAD(P)-binding domain
 IPR029939  MICAL2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001947 heart looping IMP
 biological_processGO:0007010 cytoskeleton organization ISS
 biological_processGO:0007507 heart development IMP
 biological_processGO:0010735 positive regulation of transcription via serum response element binding IEA
 biological_processGO:0030042 actin filament depolymerization IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity ISS
 molecular_functionGO:0043914 NADPH:sulfur oxidoreductase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071949 FAD binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr