ENSDARG00000020679


Danio rerio

Features
Gene ID: ENSDARG00000020679
  
Biological name :clpp
  
Synonyms : caseinolytic mitochondrial matrix peptidase proteolytic subunit / clpp
  
Possible biological names infered from orthology : ATP-dependent Clp protease proteolytic subunit, mitochondrial / O88696 / Q16740
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 34129505
Gene end: 34136778
  
Corresponding Affymetrix probe sets: Dr.9514.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116641
Ensembl peptide - ENSDARP00000116965
Ensembl peptide - ENSDARP00000147729
swissprot - A2BHT9
swissprot - Q5PNM4
ZFIN ID - ZDB-GENE-030131-7860
Ensembl - ENSDARG00000020679
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLPPENSG00000125656Homo sapiens
 ClppENSMUSG00000002660Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001907  ATP-dependent Clp protease proteolytic subunit
 IPR018215  ClpP, Ser active site
 IPR023562  Clp protease proteolytic subunit /Translocation-enhancing protein TepA
 IPR029045  ClpP/crotonase-like domain superfamily
 IPR033135  ClpP, histidine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr