ENSG00000125656


Homo sapiens

Features
Gene ID: ENSG00000125656
  
Biological name :CLPP
  
Synonyms : caseinolytic mitochondrial matrix peptidase proteolytic subunit / CLPP / Q16740
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.3
Gene start: 6361452
Gene end: 6368910
  
Corresponding Affymetrix probe sets: 202799_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494298
Ensembl peptide - ENSP00000245816
Ensembl peptide - ENSP00000469124
Ensembl peptide - ENSP00000470098
Ensembl peptide - ENSP00000472227
NCBI entrez gene - 8192     See in Manteia.
OMIM - 601119
RefSeq - NM_006012
RefSeq Peptide - NP_006003
swissprot - M0QXE9
swissprot - M0QYV5
swissprot - M0R208
swissprot - Q16740
Ensembl - ENSG00000125656
  
Related genetic diseases (OMIM): 614129 - Perrault syndrome 3, 614129
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clppENSDARG00000020679Danio rerio
 ClppENSMUSG00000002660Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001907  ATP-dependent Clp protease proteolytic subunit
 IPR018215  ClpP, Ser active site
 IPR023562  Clp protease proteolytic subunit /Translocation-enhancing protein TepA
 IPR029045  ClpP/crotonase-like domain superfamily
 IPR033135  ClpP, histidine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0051603 proteolysis involved in cellular protein catabolic process IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0009368 endopeptidase Clp complex IDA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008236 serine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000013 Hypoplastic uterus 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000786 Primary amenorrhea 
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 HP:0000815 Hypergonadotropic hypogonadism "Reduced function of the gonads (testes in males or ovaries in females) associated with excess pituitary gonadotropin secretion and resulting in delayed sexual development and growth delay." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0008527 Congenital sensorineural hearing loss 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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