ENSDARG00000020840


Danio rerio

Features
Gene ID: ENSDARG00000020840
  
Biological name :mcrs1
  
Synonyms : mcrs1 / microspherule protein 1
  
Possible biological names infered from orthology : Q96EZ8 / Q99L90
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 3364193
Gene end: 3381343
  
Corresponding Affymetrix probe sets: Dr.23962.1.A1_at (Zebrafish Array)   NM_213273_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000023460
Ensembl peptide - ENSDARP00000152701
NCBI entrez gene - 406557     See in Manteia.
RefSeq - NM_213273
RefSeq Peptide - NP_998438
swissprot - Q6P0E3
ZFIN ID - ZDB-GENE-040426-2434
Ensembl - ENSDARG00000020840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCRS1ENSG00000187778Homo sapiens
 Mcrs1ENSMUSG00000037570Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR008984  SMAD/FHA domain superfamily
 IPR025999  Microspherule protein, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010842 retina layer formation IMP
 biological_processGO:0060271 cilium assembly IMP
 cellular_componentGO:0031011 Ino80 complex IEA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0002151 G-quadruplex RNA binding IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
HATs acetylate histones
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
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 ZFA:0000012 central nervous system central nervous system apoptotic , abnormal
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 ZFA:0000048 olfactory placode olfactory placode cilium decreased length , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000152 retina retina apoptotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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