ENSDARG00000021991


Danio rerio

Features
Gene ID: ENSDARG00000021991
  
Biological name :erlin1
  
Synonyms : erlin1 / ER lipid raft associated 1 / Q58EG2
  
Possible biological names infered from orthology : O75477
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 24701406
Gene end: 24717618
  
Corresponding Affymetrix probe sets: Dr.327.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000112673
Ensembl peptide - ENSDARP00000140094
Ensembl peptide - ENSDARP00000015815
NCBI entrez gene - 541490     See in Manteia.
RefSeq - XM_005156834
RefSeq Peptide - NP_001014325
swissprot - B7ZD02
swissprot - Q58EG2
ZFIN ID - ZDB-GENE-050327-13
Ensembl - ENSDARG00000021991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ERLIN1ENSGALG00000003308Gallus gallus
 ERLIN1ENSG00000107566Homo sapiens
 Erlin1ENSMUSG00000025198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A3QK16 / erlin2 / ER lipid raft associated 2 / O94905* / Q8BFZ9*ENSDARG0000008652369
erlin2 / ER lipid raft associated 2 / O94905* / Q8BFZ9*ENSDARG0000009596846


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR033294  Erlin1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0008202 steroid metabolic process IEA
 biological_processGO:0008203 cholesterol metabolic process IEA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0032933 SREBP signaling pathway IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0015485 cholesterol binding IBA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000086523 A3QK16 / erlin2 / ER lipid raft associated 2 / O94905* / Q8BFZ9*  / complex






 

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