ENSGALG00000003308


Gallus gallus

Features
Gene ID: ENSGALG00000003308
  
Biological name :ERLIN1
  
Synonyms : ERLIN1 / ER lipid raft associated 1
  
Possible biological names infered from orthology : O75477
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 9344755
Gene end: 9360945
  
Corresponding Affymetrix probe sets: Gga.17083.1.S1_at (Chicken Array)   Gga.19187.1.S1_at (Chicken Array)   GgaAffx.25813.1.S1_at (Chicken Array)   GgaAffx.25813.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005232
Ensembl peptide - ENSGALP00000057765
Ensembl peptide - ENSGALP00000054502
NCBI entrez gene - 423670     See in Manteia.
RefSeq - NM_001031223
RefSeq Peptide - NP_001026394
swissprot - A0A1D5PXR8
swissprot - A0A1D5PNQ9
swissprot - F1NJ94
Ensembl - ENSGALG00000003308
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 erlin1ENSDARG00000021991Danio rerio
 ERLIN1ENSG00000107566Homo sapiens
 Erlin1ENSMUSG00000025198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ERLIN2 / ER lipid raft associated 2 / O94905* / Q8BFZ9*ENSGALG0000000309268


Protein motifs (from Interpro)
Interpro ID Name
 IPR001107  Band 7 domain
 IPR033294  Erlin1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0032933 SREBP signaling pathway IEA
 biological_processGO:0045541 negative regulation of cholesterol biosynthetic process IEA
 biological_processGO:0045717 negative regulation of fatty acid biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 molecular_functionGO:0015485 cholesterol binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003092 ERLIN2 / ER lipid raft associated 2 / O94905* / Q8BFZ9*  / complex






 

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contact: otassy@igbmc.fr