ENSDARG00000022203


Danio rerio

Features
Gene ID: ENSDARG00000022203
  
Biological name :gtf2ird1
  
Synonyms : gtf2ird1 / GTF2I repeat domain containing 1
  
Possible biological names infered from orthology : Q9JI57 / Q9UHL9 / ral transcription factor II-I repeat domain-containing protein 1
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 59494079
Gene end: 59550943
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123826
Ensembl peptide - ENSDARP00000146888
swissprot - F8W502
ZFIN ID - ZDB-GENE-010328-18
Ensembl - ENSDARG00000022203
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF2IRD1ENSGALG00000001263Gallus gallus
 Q9UHL9ENSG00000006704Homo sapiens
 Q9JI57ENSMUSG00000023079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004212  GTF2I-like repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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