ENSGALG00000001263


Gallus gallus

Features
Gene ID: ENSGALG00000001263
  
Biological name :GTF2IRD1
  
Synonyms : GTF2IRD1 / GTF2I repeat domain containing 1
  
Possible biological names infered from orthology : Q9JI57 / Q9UHL9 / ral transcription factor II-I repeat domain-containing protein 1
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 2692300
Gene end: 2727020
  
Corresponding Affymetrix probe sets: GgaAffx.843.1.S1_s_at (Chicken Array)   GgaAffx.843.5.S1_at (Chicken Array)   GgaAffx.843.5.S1_s_at (Chicken Array)   GgaAffx.843.7.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001924
NCBI entrez gene - 417487     See in Manteia.
RefSeq - XM_015295960
RefSeq - XM_015295961
RefSeq - XM_015295962
RefSeq - XM_015295963
RefSeq - XM_015295964
RefSeq - XM_015295965
RefSeq - XM_015295966
RefSeq - XM_003642395
swissprot - E1BQP2
Ensembl - ENSGALG00000001263
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gtf2ird1ENSDARG00000022203Danio rerio
 Q9UHL9ENSG00000006704Homo sapiens
 Q9JI57ENSMUSG00000023079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GTF2I / general transcription factor IIi / P78347* / Q9ESZ8* / Mus musculusral transcription factor II I (Gtf2i), transcript variant 7, mRNA.*ENSGALG0000002166525


Protein motifs (from Interpro)
Interpro ID Name
 IPR004212  GTF2I-like repeat
 IPR016659  Transcription factor II-I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0014886 transition between slow and fast fiber IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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