ENSDARG00000022788


Danio rerio

Features
Gene ID: ENSDARG00000022788
  
Biological name :cops7a
  
Synonyms : COP9 constitutive photomorphogenic homolog subunit 7A / cops7a
  
Possible biological names infered from orthology : COP9 signalosome subunit 7A / Mus musculus COP9 signalosome subunit 7A (Cops7a), transcript variant 4, mRNA. / Q9CZ04 / Q9UBW8
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 21751922
Gene end: 21777545
  
Corresponding Affymetrix probe sets: Dr.11003.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000029462
NCBI entrez gene - 336736     See in Manteia.
RefSeq - NM_001305596
RefSeq Peptide - NP_001292525
swissprot - F6PBL6
ZFIN ID - ZDB-GENE-030131-8680
Ensembl - ENSDARG00000022788
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COPS7AENSGALG00000014467Gallus gallus
 COPS7AENSG00000111652Homo sapiens
 Cops7aENSMUSG00000030127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0008180 COP9 signalosome IEA


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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