ENSG00000111652


Homo sapiens

Features
Gene ID: ENSG00000111652
  
Biological name :COPS7A
  
Synonyms : COP9 signalosome subunit 7A / COPS7A / Q9UBW8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: p13.31
Gene start: 6723741
Gene end: 6731875
  
Corresponding Affymetrix probe sets: 209029_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000473363
Ensembl peptide - ENSP00000487362
Ensembl peptide - ENSP00000229251
Ensembl peptide - ENSP00000387787
Ensembl peptide - ENSP00000438115
Ensembl peptide - ENSP00000438352
Ensembl peptide - ENSP00000438363
Ensembl peptide - ENSP00000438571
Ensembl peptide - ENSP00000439158
Ensembl peptide - ENSP00000439547
Ensembl peptide - ENSP00000439949
Ensembl peptide - ENSP00000440020
Ensembl peptide - ENSP00000440683
Ensembl peptide - ENSP00000440972
Ensembl peptide - ENSP00000441852
Ensembl peptide - ENSP00000442613
Ensembl peptide - ENSP00000443628
Ensembl peptide - ENSP00000444807
Ensembl peptide - ENSP00000445300
Ensembl peptide - ENSP00000446039
NCBI entrez gene - 50813     See in Manteia.
OMIM - 616009
RefSeq - XM_005253694
RefSeq - NM_001164093
RefSeq - NM_001164094
RefSeq - NM_001164095
RefSeq - NM_016319
RefSeq Peptide - NP_001157567
RefSeq Peptide - NP_057403
RefSeq Peptide - NP_001157565
RefSeq Peptide - NP_001157566
swissprot - F5GXT7
swissprot - F5GYF7
swissprot - F5H248
swissprot - F5H3M6
swissprot - F5H4Z0
swissprot - F5H4U8
swissprot - F5H7C6
swissprot - G3XAP1
swissprot - Q9UBW8
Ensembl - ENSG00000111652
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cops7aENSDARG00000022788Danio rerio
 COPS7AENSGALG00000014467Gallus gallus
 Cops7aENSMUSG00000030127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COPS7B / Q9H9Q2 / COP9 signalosome subunit 7BENSG0000014452448


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IDA
 biological_processGO:0000715 nucleotide-excision repair, DNA damage recognition TAS
 biological_processGO:0006283 transcription-coupled nucleotide-excision repair TAS
 biological_processGO:0043687 post-translational protein modification TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0008180 COP9 signalosome IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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