ENSMUSG00000030127


Mus musculus

Features
Gene ID: ENSMUSG00000030127
  
Biological name :Cops7a
  
Synonyms : Cops7a / Mus musculus COP9 signalosome subunit 7A (Cops7a), transcript variant 4, mRNA. / Q9CZ04
  
Possible biological names infered from orthology : COP9 signalosome subunit 7A / Q9UBW8
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: F2
Gene start: 124958413
Gene end: 124965538
  
Corresponding Affymetrix probe sets: 10547926 (MoGene1.0st)   1423245_at (Mouse Genome 430 2.0 Array)   1429078_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117584
Ensembl peptide - ENSMUSP00000108058
Ensembl peptide - ENSMUSP00000114420
Ensembl peptide - ENSMUSP00000115348
Ensembl peptide - ENSMUSP00000032220
NCBI entrez gene - 26894     See in Manteia.
MGI - MGI:1349400
RefSeq - XM_017321593
RefSeq - NM_012003
RefSeq - XM_006506157
RefSeq - XM_006506159
RefSeq - XM_006506160
RefSeq - XM_006506161
RefSeq - XM_006506162
RefSeq - XM_011241365
RefSeq - XM_011241366
RefSeq - NM_001164089
RefSeq - NM_001355542
RefSeq Peptide - NP_036133
RefSeq Peptide - NP_001157561
RefSeq Peptide - NP_001342470
RefSeq Peptide - NP_001342471
swissprot - D3YVI6
swissprot - D3Z0S0
swissprot - Q9CZ04
swissprot - D3Z440
Ensembl - ENSMUSG00000030127
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cops7aENSDARG00000022788Danio rerio
 COPS7AENSGALG00000014467Gallus gallus
 COPS7AENSG00000111652Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cops7b / Q8BV13 / COP9 signalosome complex subunit 7b / Q9H9Q2* / COP9 signalosome subunit 7B*ENSMUSG0000002624055


Protein motifs (from Interpro)
Interpro ID Name
 IPR000717  Proteasome component (PCI) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0008180 COP9 signalosome IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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