ENSDARG00000022891


Danio rerio

Features
Gene ID: ENSDARG00000022891
  
Biological name :zgc:175214
  
Synonyms : zgc:175214
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 49481203
Gene end: 49498116
  
Corresponding Affymetrix probe sets: Dr.17787.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119883
NCBI entrez gene - 557610     See in Manteia.
RefSeq - XM_005160114
RefSeq Peptide - NP_001108199
swissprot - B0JZN6
ZFIN ID - ZDB-GENE-080303-32
Ensembl - ENSDARG00000022891
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-51a16.9ENSDARG0000003948368
si:ch1073-392o20.1 / Q8BP31* / Q9H9V4* / RNF122* / ring finger protein 122*ENSDARG0000010207548
rnf24 / ring finger protein 24 / Q8BGI1* / Q9Y225*ENSDARG0000003696539


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr