ENSDARG00000036965


Danio rerio

Features
Gene ID: ENSDARG00000036965
  
Biological name :rnf24
  
Synonyms : ring finger protein 24 / rnf24
  
Possible biological names infered from orthology : Q8BGI1 / Q9Y225
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 41770842
Gene end: 41817784
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116519
Ensembl peptide - ENSDARP00000053680
NCBI entrez gene - 492480     See in Manteia.
RefSeq - NM_001007352
RefSeq Peptide - NP_001007353
swissprot - B8A459
swissprot - Q5U3J0
ZFIN ID - ZDB-GENE-041114-40
Ensembl - ENSDARG00000036965
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF24ENSGALG00000027533Gallus gallus
 RNF24ENSG00000101236Homo sapiens
 Rnf24ENSMUSG00000048911Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch1073-392o20.1 / Q8BP31* / Q9H9V4* / RNF122* / ring finger protein 122*ENSDARG0000010207543
si:dkey-51a16.9ENSDARG0000003948340
zgc:175214ENSDARG0000002289140


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr