ENSDARG00000023648


Danio rerio

Features
Gene ID: ENSDARG00000023648
  
Biological name :idh3g
  
Synonyms : idh3g / isocitrate dehydrogenase 3 (NAD+) gamma
  
Possible biological names infered from orthology : 4933405O20Rik / P51553 / P70404 / Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial / Q8BPC6
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 25121998
Gene end: 25135105
  
Corresponding Affymetrix probe sets: Dr.9653.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133894
Ensembl peptide - ENSDARP00000153139
Ensembl peptide - ENSDARP00000035380
Ensembl peptide - ENSDARP00000094764
NCBI entrez gene - 550579     See in Manteia.
RefSeq - NM_001243172
RefSeq Peptide - NP_001230101
swissprot - A0A0R4IJR5
swissprot - F1QZA4
swissprot - Q566P0
ZFIN ID - ZDB-GENE-050417-435
Ensembl - ENSDARG00000023648
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IDH3GENSG00000067829Homo sapiens
 Idh3gENSMUSG00000002010Mus musculus
 Q8BPC6ENSMUSG00000084234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
idh3b / isocitrate dehydrogenase 3 (NAD+) beta / O43837*ENSDARG0000004475347


Protein motifs (from Interpro)
Interpro ID Name
 IPR004434  Isocitrate dehydrogenase NAD-dependent
 IPR019818  Isocitrate/isopropylmalate dehydrogenase, conserved site
 IPR024084  Isopropylmalate dehydrogenase-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006099 tricarboxylic acid cycle IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0004449 isocitrate dehydrogenase (NAD+) activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Citric acid cycle (TCA cycle)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000044753 idh3b / isocitrate dehydrogenase 3 (NAD+) beta / O43837*  / complex
 ENSDARG00000030278 idh3a / isocitrate dehydrogenase 3 (NAD+) alpha / P50213* / Q9D6R2* / Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial *  / complex






 

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contact: otassy@igbmc.fr