ENSDARG00000023694


Danio rerio

Features
Gene ID: ENSDARG00000023694
  
Biological name :spon1b
  
Synonyms : spon1b / spondin 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 15647750
Gene end: 15800834
  
Corresponding Affymetrix probe sets: Dr.565.1.S1_at (Zebrafish Array)   NM_131517_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114522
Ensembl peptide - ENSDARP00000034007
Ensembl peptide - ENSDARP00000152322
NCBI entrez gene - 58029     See in Manteia.
RefSeq - NM_131517
RefSeq - XM_005174346
RefSeq Peptide - NP_571592
swissprot - F1R2Z9
swissprot - A2BFS0
ZFIN ID - ZDB-GENE-000427-10
Ensembl - ENSDARG00000023694
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spon1a / spondin 1a / SPON1* / Q9HCB6* / Q8VCC9* / spondin 1* / spondin 1, (f-spondin) extracellular matrix protein*ENSDARG0000001002971
spon2a / spondin 2a, extracellular matrix proteinENSDARG0000002546513
spon2b / spondin 2b, extracellular matrix protein / SPON2* / Q9BUD6* / Q8BMS2* / spondin 2*ENSDARG0000000273212


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR002861  Reeler domain
 IPR009465  Spondin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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