ENSDARG00000010029


Danio rerio

Features
Gene ID: ENSDARG00000010029
  
Biological name :spon1a
  
Synonyms : spon1a / spondin 1a
  
Possible biological names infered from orthology : Q8VCC9 / Q9HCB6 / SPON1 / spondin 1 / spondin 1, (f-spondin) extracellular matrix protein
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 28564640
Gene end: 28880191
  
Corresponding Affymetrix probe sets: Dr.564.1.S1_at (Zebrafish Array)   NM_131515_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000026964
NCBI entrez gene - 58027     See in Manteia.
RefSeq - NM_131515
RefSeq Peptide - NP_571590
swissprot - Q1LUZ8
ZFIN ID - ZDB-GENE-000427-9
Ensembl - ENSDARG00000010029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPON1ENSGALG00000038775Gallus gallus
 SPON1ENSG00000262655Homo sapiens
 Spon1ENSMUSG00000038156Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spon1b / spondin 1bENSDARG0000002369471
spon2a / spondin 2a, extracellular matrix proteinENSDARG0000002546513
spon2b / spondin 2b, extracellular matrix protein / SPON2* / Q9BUD6* / Q8BMS2* / spondin 2*ENSDARG0000000273213


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR002861  Reeler domain
 IPR009465  Spondin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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