ENSG00000262655


Homo sapiens

Features
Gene ID: ENSG00000262655
  
Biological name :SPON1
  
Synonyms : Q9HCB6 / SPON1 / spondin 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.2
Gene start: 13962689
Gene end: 14267884
  
Corresponding Affymetrix probe sets: 209436_at (Human Genome U133 Plus 2.0 Array)   209437_s_at (Human Genome U133 Plus 2.0 Array)   213993_at (Human Genome U133 Plus 2.0 Array)   213994_s_at (Human Genome U133 Plus 2.0 Array)   224488_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000460236
NCBI entrez gene - 10418     See in Manteia.
OMIM - 604989
RefSeq - NM_006108
RefSeq Peptide - NP_006099
swissprot - Q9HCB6
Ensembl - ENSG00000262655
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spon1aENSDARG00000010029Danio rerio
 SPON1ENSGALG00000038775Gallus gallus
 Spon1ENSMUSG00000038156Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPON2 / Q9BUD6 / spondin 2ENSG0000015967413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR002861  Reeler domain
 IPR009465  Spondin, N-terminal
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0036066 protein O-linked fucosylation TAS
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0031012 extracellular matrix ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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