ENSDARG00000002732


Danio rerio

Features
Gene ID: ENSDARG00000002732
  
Biological name :spon2b
  
Synonyms : spon2b / spondin 2b, extracellular matrix protein
  
Possible biological names infered from orthology : Q8BMS2 / Q9BUD6 / SPON2 / spondin 2
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 17376940
Gene end: 17382534
  
Corresponding Affymetrix probe sets: Dr.563.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000023050
Ensembl peptide - ENSDARP00000054589
swissprot - F1QA83
ZFIN ID - ZDB-GENE-990415-161
Ensembl - ENSDARG00000002732
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPON2ENSGALG00000038433Gallus gallus
 SPON2ENSG00000159674Homo sapiens
 Spon2ENSMUSG00000037379Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
spon2a / spondin 2a, extracellular matrix proteinENSDARG0000002546544
spon1a / spondin 1a / SPON1* / Q9HCB6* / Q8VCC9* / spondin 1* / spondin 1, (f-spondin) extracellular matrix protein*ENSDARG0000001002932
spon1b / spondin 1bENSDARG0000002369430


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR009465  Spondin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr