ENSGALG00000038433


Gallus gallus

Features
Gene ID: ENSGALG00000038433
  
Biological name :SPON2
  
Synonyms : SPON2 / spondin 2
  
Possible biological names infered from orthology : Q8BMS2 / Q9BUD6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 85477008
Gene end: 85483148
  
Corresponding Affymetrix probe sets: Gga.9731.1.S1_at (Chicken Array)   Gga.9731.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056895
NCBI entrez gene - 422905     See in Manteia.
RefSeq - XM_004936233
RefSeq - XM_015285992
swissprot - A0A1D5PVD0
Ensembl - ENSGALG00000038433
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spon2bENSDARG00000002732Danio rerio
 SPON2ENSG00000159674Homo sapiens
 Spon2ENSMUSG00000037379Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPON1 / spondin-1 precursor / Q9HCB6* / Q8VCC9* / spondin 1* / spondin 1, (f-spondin) extracellular matrix protein*ENSGALG0000003877532


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR009465  Spondin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002448 mast cell mediated immunity IEA
 biological_processGO:0008228 opsonization IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0032755 positive regulation of interleukin-6 production IEA
 biological_processGO:0032760 positive regulation of tumor necrosis factor production IEA
 biological_processGO:0042742 defense response to bacterium IEA
 biological_processGO:0043152 induction of bacterial agglutination IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0050832 defense response to fungus IEA
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:0060907 positive regulation of macrophage cytokine production IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0001530 lipopolysaccharide binding IEA
 molecular_functionGO:0003823 antigen binding IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr