ENSDARG00000024219


Danio rerio

Features
Gene ID: ENSDARG00000024219
  
Biological name :zgc:55582
  
Synonyms : zgc:55582
  
Possible biological names infered from orthology : CDK5RAP2 / CDK5 regulatory subunit associated protein 2 / Q8K389 / Q96SN8
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 4647784
Gene end: 4695583
  
Corresponding Affymetrix probe sets: Dr.11421.1.A1_at (Zebrafish Array)   Dr.23475.1.S1_at (Zebrafish Array)   NM_199901_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000028290
NCBI entrez gene - 334460     See in Manteia.
RefSeq - NM_199901
RefSeq Peptide - NP_956195
swissprot - F1QAA8
ZFIN ID - ZDB-GENE-030131-6392
Ensembl - ENSDARG00000024219
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDK5RAP2ENSGALG00000041102Gallus gallus
 Q96SN8ENSG00000136861Homo sapiens
 Q8K389ENSMUSG00000039298Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-242b18.1 / Q5VU43* / Q80YT7* / PDE4DIP* / phosphodiesterase 4D interacting protein* / phosphodiesterase 4D interacting protein (myomegalin)*ENSDARG0000005472317


Protein motifs (from Interpro)
Interpro ID Name
 IPR012943  Centrosomin, N-terminal motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005815 microtubule organizing center IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr