ENSDARG00000024314


Danio rerio

Features
Gene ID: ENSDARG00000024314
  
Biological name :herpud1
  
Synonyms : herpud1 / homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
  
Possible biological names infered from orthology : homocysteine inducible ER protein with ubiquitin like domain 1 / Mus musculus homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (Herpud1), transcript variant 2, mRNA. / Q15011 / Q9JJK5
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 17600570
Gene end: 17611849
  
Corresponding Affymetrix probe sets: Dr.9626.1.A1_at (Zebrafish Array)   NM_001025537_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126555
Ensembl peptide - ENSDARP00000126498
Ensembl peptide - ENSDARP00000126535
Ensembl peptide - ENSDARP00000126459
Ensembl peptide - ENSDARP00000144135
NCBI entrez gene - 565499     See in Manteia.
RefSeq - NM_001025537
RefSeq Peptide - NP_001020708
swissprot - K7DYD0
swissprot - A0A286YAA4
swissprot - K7DYG9
swissprot - K7DYK6
swissprot - K7DYM6
ZFIN ID - ZDB-GENE-050913-47
Ensembl - ENSDARG00000024314
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HERPUD1ENSGALG00000001220Gallus gallus
 Q15011ENSG00000051108Homo sapiens
 Q9JJK5ENSMUSG00000031770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
herpud2 / HERPUD family member 2 / Q9BSE4* / Q9JJC9* / Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein *ENSDARG0000002103336


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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