ENSDARG00000024846


Danio rerio

Features
Gene ID: ENSDARG00000024846
  
Biological name :cops8
  
Synonyms : COP9 signalosome subunit 8 / cops8 / Q7ZUZ0
  
Possible biological names infered from orthology : COP9 signalosome complex subunit 8 / Q8VBV7 / Q99627
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 23895711
Gene end: 23906205
  
Corresponding Affymetrix probe sets: Dr.4360.1.S1_at (Zebrafish Array)   NM_200229_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037304
NCBI entrez gene - 393198     See in Manteia.
RefSeq - NM_200229
RefSeq Peptide - NP_956523
swissprot - Q7ZUZ0
ZFIN ID - ZDB-GENE-040426-982
Ensembl - ENSDARG00000024846
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COPS8ENSGALG00000033385Gallus gallus
 COPS8ENSG00000198612Homo sapiens
 Cops8ENSMUSG00000034432Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011991  ArsR-like helix-turn-helix domain
 IPR033205  COP9 signalosome, subunit CSN8
 IPR033464  CSN8/PSMD8/EIF3K


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000338 protein deneddylation IEA
 biological_processGO:0010387 COP9 signalosome assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0008180 COP9 signalosome IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
DNA Damage Recognition in GG-NER
Formation of TC-NER Pre-Incision Complex
Cargo recognition for clathrin-mediated endocytosis
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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