ENSDARG00000025043


Danio rerio

Features
Gene ID: ENSDARG00000025043
  
Biological name :trip13
  
Synonyms : thyroid hormone receptor interactor 13 / trip13
  
Possible biological names infered from orthology : Q15645 / Q3UA06
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 52966812
Gene end: 52991487
  
Corresponding Affymetrix probe sets: Dr.5406.1.A1_at (Zebrafish Array)   NM_200582_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049098
Ensembl peptide - ENSDARP00000124487
Ensembl peptide - ENSDARP00000124863
NCBI entrez gene - 393554     See in Manteia.
RefSeq - NM_200582
RefSeq - XM_005170125
RefSeq - XM_017351326
RefSeq Peptide - NP_956876
swissprot - F8W361
swissprot - F1RBS4
swissprot - F8W241
ZFIN ID - ZDB-GENE-040426-1488
Ensembl - ENSDARG00000025043
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E1C6Q1ENSGALG00000033834Gallus gallus
 Q15645ENSG00000071539Homo sapiens
 Q3UA06ENSMUSG00000021569Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr