ENSGALG00000033834


Gallus gallus

Features
Gene ID: ENSGALG00000033834
  
Biological name :TRIP13
  
Synonyms : E1C6Q1 / Pachytene checkpoint protein 2 homolog / TRIP13
  
Possible biological names infered from orthology : Q15645 / Q3UA06 / thyroid hormone receptor interactor 13
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 55710333
Gene end: 55725601
  
Corresponding Affymetrix probe sets: Gga.3743.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045646
Ensembl peptide - ENSGALP00000064487
Ensembl peptide - ENSGALP00000064186
NCBI entrez gene - 420798     See in Manteia.
RefSeq - NM_001305055
RefSeq - NM_001305056
RefSeq Peptide - NP_001291984
RefSeq Peptide - NP_001291985
swissprot - E1C6Q1
swissprot - A0A1D5NZ34
Ensembl - ENSGALG00000033834
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trip13ENSDARG00000025043Danio rerio
 Q15645ENSG00000071539Homo sapiens
 Q3UA06ENSMUSG00000021569Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001270  ClpA/B family
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001556 oocyte maturation IEA
 biological_processGO:0006302 double-strand break repair ISS
 biological_processGO:0007094 mitotic spindle assembly checkpoint IEA
 biological_processGO:0007130 synaptonemal complex assembly ISS
 biological_processGO:0007131 reciprocal meiotic recombination ISS
 biological_processGO:0007141 male meiosis I IEA
 biological_processGO:0007144 female meiosis I IEA
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0048477 oogenesis ISS
 biological_processGO:0051321 meiotic cell cycle IEA
 cellular_componentGO:0001673 male germ cell nucleus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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