ENSDARG00000027744


Danio rerio

Features
Gene ID: ENSDARG00000027744
  
Biological name :gadd45ba
  
Synonyms : gadd45ba / growth arrest and DNA-damage-inducible, beta a
  
Possible biological names infered from orthology : GADD45B / growth arrest and DNA damage inducible beta / Growth arrest and DNA damage-inducible protein GADD45 beta / O75293 / P22339
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 6456146
Gene end: 6457748
  
Corresponding Affymetrix probe sets: Dr.1378.1.S1_at (Zebrafish Array)   Dr.1378.2.S1_a_at (Zebrafish Array)   NM_213031_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000028333
NCBI entrez gene - 406304     See in Manteia.
RefSeq - NM_213031
RefSeq Peptide - NP_998196
swissprot - Q6PC51
ZFIN ID - ZDB-GENE-040426-1971
Ensembl - ENSDARG00000027744
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GADD45BENSGALG00000029968Gallus gallus
 O75293ENSG00000099860Homo sapiens
 P22339ENSMUSG00000015312Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gadd45bb / growth arrest and DNA-damage-inducible, beta b / O75293* / P22339* / GADD45B* / growth arrest and DNA damage inducible beta* / Growth arrest and DNA damage-inducible protein GADD45 beta *ENSDARG0000001357673
gadd45ga / growth arrest and DNA-damage-inducible, gamma a / O95257* / GADD45G* / growth arrest and DNA damage inducible gamma*ENSDARG0000001941757
gadd45aa / growth arrest and DNA-damage-inducible, alpha, a / P24522* / P48316* / GADD45A* / growth arrest and DNA damage inducible alpha* / Growth arrest and DNA damage-inducible protein G...ENSDARG0000004358157
gadd45ab / growth arrest and DNA-damage-inducible, alpha, b / P24522* / P48316* / GADD45A* / growth arrest and DNA damage inducible alpha* / Growth arrest and DNA damage-inducible protein G...ENSDARG0000010457156
gadd45gb.1 / growth arrest and DNA-damage-inducible, gamma b, tandem duplicate 1 / O95257* / GADD45G* / growth arrest and DNA damage inducible gamma*ENSDARG0000001672548
BX530077.1 / O95257* / GADD45G* / growth arrest and DNA damage inducible gamma*ENSDARG0000011310333


Protein motifs (from Interpro)
Interpro ID Name
 IPR004038  Ribosomal protein L7Ae/L30e/S12e/Gadd45
 IPR024824  Growth arrest and DNA damage-inducible protein GADD45
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000185 activation of MAPKKK activity IBA
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0006950 response to stress IEA
 biological_processGO:0046686 response to cadmium ion IEP
 biological_processGO:0051597 response to methylmercury IDA
 biological_processGO:0051726 regulation of cell cycle IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye anatomical region edematous , ameliorated
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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