ENSDARG00000027938


Danio rerio

Features
Gene ID: ENSDARG00000027938
  
Biological name :rad18
  
Synonyms : rad18 / RAD18 E3 ubiquitin protein ligase
  
Possible biological names infered from orthology : Q9NS91 / Q9QXK2
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 41808673
Gene end: 41887398
  
Corresponding Affymetrix probe sets: Dr.15214.1.S1_at (Zebrafish Array)   Dr.15214.2.A1_at (Zebrafish Array)   NM_200137_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000035402
NCBI entrez gene - 393106     See in Manteia.
RefSeq - NM_200137
RefSeq Peptide - NP_956431
swissprot - F1QTJ5
ZFIN ID - ZDB-GENE-040426-745
Ensembl - ENSDARG00000027938
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAD18ENSGALG00000008368Gallus gallus
 RAD18ENSG00000070950Homo sapiens
 Rad18ENSMUSG00000030254Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003034  SAP domain
 IPR006642  Zinc finger, Rad18-type putative
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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