ENSDARG00000028295


Danio rerio

Features
Gene ID: ENSDARG00000028295
  
Biological name :mkrn4
  
Synonyms : makorin, ring finger protein, 4 / mkrn4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 23725957
Gene end: 23731213
  
Corresponding Affymetrix probe sets: Dr.11551.1.S1_at (Zebrafish Array)   Dr.11551.2.S1_a_at (Zebrafish Array)   Dr.26357.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095121
Ensembl peptide - ENSDARP00000116299
Ensembl peptide - ENSDARP00000114369
NCBI entrez gene - 559882     See in Manteia.
RefSeq - NM_001128336
RefSeq - XM_005167043
RefSeq Peptide - NP_001121808
swissprot - A9C4A6
swissprot - A9C4A8
swissprot - A9C4A7
ZFIN ID - ZDB-GENE-030131-5954
Ensembl - ENSDARG00000028295
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mkrn1 / Q4VBT5 / makorin, ring finger protein, 1 / MKRN3* / Q9UHC7* / Q13064* / Q60764* / Q9QXP6* / makorin ring finger protein 3* / Probable E3 ubiquitin-protein ligase makorin-3 *ENSDARG0000004166525
mkrn2 / makorin, ring finger protein, 2 / Q9ERV1* / Q9H000* / Probable E3 ubiquitin-protein ligase makorin-2 *ENSDARG0000000763023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr